I recently upgraded my WPMU installation to the latest version, and all went swimmingly except that the domain mapping plugin now seems to be broken.
I have a blog at sub.domain.com (with the main blog being at domain.com). If I set up domain mapping, I can then access it from secondblog.com, but I can't log into it.
As long as "Redirect administration pages to original blog's domain" is enabled, I can at least get to the backend for the blog (at http://sub.domain.com/wp-admin/, but the logged-in state doesn't persist when I go back to secondblog.com.
This is compounded by the fact that I want to use the "Private Only" plugin on that blog, but the problems with the domain mapping plugin result in a redirect loop which keeps sending me back to the login page.
Aside from reverting to my backup and coping with not having the security fixes of the latest WPMU version, can anyone suggest anything to try?