Hi all,
I released a new version of Plugin Commander, which gives you control over which plugins users can activate.
Check it out here:
http://firestats.cc/wiki/WPMUPluginCommander
Current features list:
* Mark any plugin in the plugins directory to be automatically activated for new blogs.
* Mass activate or deactivate a plugin for all existing blogs
* NEW: Choose which plugins users can activate and deactivate through Manage->Plugins, for this to make sense you need to disable the built-in plugins menu
Let me know if anything is broken.
Omry.